CDS

Accession Number TCMCG017C19870
gbkey CDS
Protein Id OMO84423.1
Location complement(join(102153..102255,102364..102401,102490..102610,102698..102767,102986..103156,103313..103412,103611..103798,104005..104148,104292..104355,104463..104555,104653..104738,104931..105071,105210..105305,105458..105545,105694..105855,106379..106477))
GeneID InterPro:IPR003953
Organism Corchorus olitorius
locus_tag COLO4_22089

Protein

Length 587aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01017847.1
Definition hypothetical protein COLO4_22089 [Corchorus olitorius]
Locus_tag COLO4_22089

EGGNOG-MAPPER Annotation

COG_category C
Description Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q)
KEGG_TC -
KEGG_Module M00009        [VIEW IN KEGG]
M00011        [VIEW IN KEGG]
M00148        [VIEW IN KEGG]
KEGG_Reaction R02164        [VIEW IN KEGG]
KEGG_rclass RC00045        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K00234        [VIEW IN KEGG]
EC 1.3.5.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00020        [VIEW IN KEGG]
ko00190        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01120        [VIEW IN KEGG]
ko01130        [VIEW IN KEGG]
ko01200        [VIEW IN KEGG]
ko04714        [VIEW IN KEGG]
ko04932        [VIEW IN KEGG]
ko05010        [VIEW IN KEGG]
ko05012        [VIEW IN KEGG]
ko05016        [VIEW IN KEGG]
map00020        [VIEW IN KEGG]
map00190        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01120        [VIEW IN KEGG]
map01130        [VIEW IN KEGG]
map01200        [VIEW IN KEGG]
map04714        [VIEW IN KEGG]
map04932        [VIEW IN KEGG]
map05010        [VIEW IN KEGG]
map05012        [VIEW IN KEGG]
map05016        [VIEW IN KEGG]
GOs GO:0000104        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005618        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0005746        [VIEW IN EMBL-EBI]
GO:0005749        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006099        [VIEW IN EMBL-EBI]
GO:0006101        [VIEW IN EMBL-EBI]
GO:0006119        [VIEW IN EMBL-EBI]
GO:0006121        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006163        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009055        [VIEW IN EMBL-EBI]
GO:0009060        [VIEW IN EMBL-EBI]
GO:0009061        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009123        [VIEW IN EMBL-EBI]
GO:0009126        [VIEW IN EMBL-EBI]
GO:0009141        [VIEW IN EMBL-EBI]
GO:0009144        [VIEW IN EMBL-EBI]
GO:0009150        [VIEW IN EMBL-EBI]
GO:0009161        [VIEW IN EMBL-EBI]
GO:0009167        [VIEW IN EMBL-EBI]
GO:0009199        [VIEW IN EMBL-EBI]
GO:0009205        [VIEW IN EMBL-EBI]
GO:0009259        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016491        [VIEW IN EMBL-EBI]
GO:0016627        [VIEW IN EMBL-EBI]
GO:0016999        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017144        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019693        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0022900        [VIEW IN EMBL-EBI]
GO:0022904        [VIEW IN EMBL-EBI]
GO:0030312        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042773        [VIEW IN EMBL-EBI]
GO:0042775        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043169        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044455        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045257        [VIEW IN EMBL-EBI]
GO:0045273        [VIEW IN EMBL-EBI]
GO:0045281        [VIEW IN EMBL-EBI]
GO:0045283        [VIEW IN EMBL-EBI]
GO:0045333        [VIEW IN EMBL-EBI]
GO:0046034        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046872        [VIEW IN EMBL-EBI]
GO:0046914        [VIEW IN EMBL-EBI]
GO:0050897        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0070469        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0072350        [VIEW IN EMBL-EBI]
GO:0072521        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0098800        [VIEW IN EMBL-EBI]
GO:0098803        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1990204        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTGGCGCTGCGTTTCTCGTAGCCTTCGAGCTCCATACTCGAAGAGATCGGTCTCAAATGACTCCGTTAGATCTCACATTTCCAGATTCTTCTCCACCGGTCGATCCTCTTATACGATAGTGGATCATACATATGATGCCGTTGTGGTTGGTGCTGGTGGTGCGGGGCTGAGGGCAGCCATAGGTCTTTCAGAGCATGGATTCAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGATCACATACTGTTGCAGCTCAGGGTGGTATAAATGCTGCTTTAGGAAATATGACTGAAGATGACTGGCGATGGCACATGTATGACACAGTTAAAGGAAGTGATTGGTTAGGTGATCAAGATGCAATCCAATATATGTGCAGGGAAGCACCAAAAGCTGTGATTGAACTTGAGAATTATGGGTTACCCTTTTCTCGAACAGAAGATGGTGGACAGGCTTATCGCTGTGCATGTGCTGCTGATAGAACTGGGCATGCTTTGTTGCACACACTCTATGGCCAAGCTATGAAACACAATACCCAATTCTTTGTGGAATACTTTGCGTTGGATCTGTTGATGAGCAATGATGGGACCTGCCAGGGAGTGATTGCATTGAACATGGAAGATGGAACGCTACATCGATTCCGTGCAGCTTCAACAATTCTTGCCACTGGGGGATATGGTAGAGCCTATTTTTCTGCAACCTCAGCTCACACATGCACCGGTGATGGCAATGCTATGGTTGCACGCGCTGGGCTTCCCCTCCAGGACTTGGAGTTTGTGCAATTTCACCCAACTGGAATATATGGGGCTGGGTGCCTCATCACTGAAGGGTCTCGTGGTGAAGGTGGTATCCTTAGAAATAGTGAAGGTGAACGGTTTATGGAACGATATGCCCCTACAGCCAAGGATCTTGCCTCAAGGGATGTTGTTTCAAGATCTATGACCATGGAAATCAGGGAAGGTCGCGGTGTAGGACCTTTGAAGGACCATATCTATCTTCACTTGAATCACTTACCCCCTGAAGTGCTGAAGGAAAGGCTTCCAGGTATCTCTGAGACGGCTGCCATTTTTGCTGGTGTGGATGTTACAAAGGAGCCCATCCCTGTCTTGCCTACTGTGCATTATAACATGGGTGGAATTCCCACAAATCATCATGGAGAGGTAGTCACTATCAAAGGTAACGATCCAGATTCTGTGGTTCCTGGACTAATGGCTGCTGGAGAGGCAGCCTGTGCATCAGTTCATGGTGCCAATCGTTTGGGGGAGAAGCAGAAACCTTTGGAAAGTGATGCTGGTGAGAAAACAGTTGCATGGCTGGACAAACTTAGAAATTCAAATGGTTCTCTTCCAACATCAAATATTCGACTGAATATGCAACGGGTAATGCAAAACAATGCTGCTGTTTTCCGCACACAGGAAACACTAGAAGAAGGTTGTCAGTTGATTGACAAGGCATGGGAAAGTTTCCATGATGTTAAGTTGAAAGATCGATCTTTAATATGGAACTCTGATTTGATAGAGACTATCGAGTTGGAAAATCTTTTAATAAATGCCTGCATCACAATGCATTCTGCCGAAGCAAGGAAAGAGAGCAGAGGGGCACATGCCCGTGAAGATTTCACGAAAAGAGATGATGAGAACTGGATGAAACACACATTGGGATATTGGGAGAAGGAGAAGGTCCGATTGGATTACCGGCCAGTTCACATGAACACATTAGATGATGAGATCGAGACATTCCCACCTAAAGCCCGTGTGTATTAA
Protein:  
MWRCVSRSLRAPYSKRSVSNDSVRSHISRFFSTGRSSYTIVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMSNDGTCQGVIALNMEDGTLHRFRAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPLKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIKGNDPDSVVPGLMAAGEAACASVHGANRLGEKQKPLESDAGEKTVAWLDKLRNSNGSLPTSNIRLNMQRVMQNNAAVFRTQETLEEGCQLIDKAWESFHDVKLKDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGYWEKEKVRLDYRPVHMNTLDDEIETFPPKARVY